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Abstract It is largely unknown how South America’s Andean forests affect the global carbon cycle, and thus regulate climate change. Here, we measure aboveground carbon dynamics over the past two decades in 119 monitoring plots spanning a range of >3000 m elevation across the subtropical and tropical Andes. Our results show that Andean forests act as strong sinks for aboveground carbon (0.67 ± 0.08 Mg C ha −1 y −1 ) and have a high potential to serve as future carbon refuges. Aboveground carbon dynamics of Andean forests are driven by abiotic and biotic factors, such as climate and size-dependent mortality of trees. The increasing aboveground carbon stocks offset the estimated C emissions due to deforestation between 2003 and 2014, resulting in a net total uptake of 0.027 Pg C y −1 . Reducing deforestation will increase Andean aboveground carbon stocks, facilitate upward species migrations, and allow for recovery of biomass losses due to climate change. 

Abstract We introduce the FunAndes database, a compilation of functional trait data for the Andean flora spanning six countries. FunAndes contains data on 24 traits across 2,694 taxa, for a total of 105,466 entries. The database features plant-morphological attributes including growth form, and leaf, stem, and wood traits measured at the species or individual level, together with geographic metadata (i.e., coordinates and elevation). FunAndes follows the field names, trait descriptions and units of measurement of the TRY database. It is currently available in open access in the FIGSHARE data repository, and will be part of TRY’s next release. Open access trait data from Andean plants will contribute to ecological research in the region, the most species rich terrestrial biodiversity hotspot. 

Abstract AimEcological niches shape species commonness and rarity, yet, the relative importance of different niche mechanisms within and across ecosystems remains unresolved. We tested the influence of niche breadth (range of environmental conditions where species occur) and niche position (marginality of a species’ environmental distribution relative to the mean environmental conditions of a region) on tree‐species abundance and occupancy across three biogeographic regions. LocationArgentinian Andes; Bolivian Amazon; Missouri Ozarks. Time period2002–2010. Major taxa studiedTrees. MethodsWe calculated abiotic‐niche breadths and abiotic‐niche positions using 16 climate, soil and topographic variables. For each region, we used model selection to test the relative influence of niche breadth and niche position on local abundance and occupancy in regional‐scale networks of 0.1‐ha forest plots. To account for species–environment associations caused by other mechanisms (e.g., dispersal), we used null models that randomized associations between species occurrences and environmental variables. ResultsWe found strong support for the niche‐position hypothesis. In all regions, species with higher local abundance and occupancy occurred in non‐marginal environments. Observed relationships between occupancy and niche position also differed from random species–environment associations in all regions. Surprisingly, we found little support for the niche‐breadth hypothesis. Observed relationships between both local abundance and niche breadth, and occupancy and niche breadth, did not differ from random species–environment associations. Main conclusionNiche position was more important than niche breadth in shaping species commonness and rarity across temperate, sub‐tropical and tropical forests. In all forests, tree species with widespread geographic distributions were associated with environmental conditions commonly found throughout the region, suggesting that niche position has similar effects on species occupancy across contrasting biogeographic regions. Our findings imply that conservation efforts aimed at protecting populations of common and rare tree species should prioritize conservation of both common and rare habitats. 

Summary Recent studies have demonstrated that ecological processes that shape community structure and dynamics change along environmental gradients. However, much less is known about how the emergence of the gradients themselves shape the evolution of species that underlie community assembly. In this study, we address how the creation of novel environments leads to community assembly via two nonmutually exclusive processes: immigration and ecological sorting of pre‐adapted clades (ISPC), and recent adaptive diversification (RAD). We study these processes in the context of the elevational gradient created by the uplift of the Central Andes.We develop a novel approach and method based on the decomposition of species turnover into within‐ and among‐clade components, where clades correspond to lineages that originated before mountain uplift. Effects of ISPC and RAD can be inferred from how components of turnover change with elevation. We test our approach using data from over 500 Andean forest plots.We found that species turnover between communities at different elevations is dominated by the replacement of clades that originated before the uplift of the Central Andes.Our results suggest that immigration and sorting of clades pre‐adapted to montane habitats is the primary mechanism shaping tree communities across elevations.